verspoor@lanl.govLast Updated: February 8, 2007
| Publications, Karin M. Verspoor |
Verspoor, K., Sanfilippo, A., Elmore, M., MacKerrow, E. (2006). Deploying Natural Language Processing for Social Science Analysis. In proceedings "What to Do with a Million Books?": Chicago Colloquium on Digital Humanities and Computer Science. Presentation slides
Gessler, DDG; Joslyn, CA; Verspoor, KM; and Schmidt, SE: (2006) Deconstruction, Reconstruction, and Ontogenesis for Large, Monolithic, Legacy Ontologies in Semantic Web Service Applications, Los Alamos Technical Report 06-5859.
CA Joslyn; DDG Gessler, SE Schmidt, and KM Verspoor (2006). Distributed Representations of Bio-Ontologies for Semantic Web Services, in: Joint BioLINK 9th Bio-Ontologies Meeting. (JBB 06) (LAUR 06-5490)
Verspoor, K., KB Cohen, B Goertzel, I Mani, editors. (2006) Proceedings of the HLT-NAACL BioNLP Workshop on Linking Natural Language and Biology. (Introduction to the workshop)
Verspoor, Karin, JD Cohn, SM Mniszewski, and CA Joslyn (2006). A Categorization Approach to Automated Ontological Function Annotation, Protein Science, v. 15, pp. 1544-1549. (LAUR 05-8673)
Maguitman, A., Rechtsteiner, A., Verspoor, K., Strauss, C.E., Rocha, L. (2006) Large-Scale Testing Of Bibliome Informatics Using Pfam Protein Families. Pacific Symposium of Biocomputing 11:76-87 (LAUR 05-6756)
Verspoor, Karin, Judith Cohn, Cliff Joslyn, Sue Mniszewski, Andreas Rechtsteiner, Luis M. Rocha, Tiago Simas. (2005) Protein Annotation as Term Categorization in the Gene Ontology using Word Proximity Networks. BMC Bioinformatics, vol 6, supplement 1. (Los Alamos Unclassified Report 04-3934).
Verspoor, Karin, JD Cohn, SM Mniszewski, and CA Joslyn. (2005) POSOLE: Automated Ontological Annotation for Function Prediction, in the Participant Notebook of the Special Interest Group meetings, Automated Function Prediction SIG, ISMB 05 (LAUR 05-4778)
Verspoor, K., Cohn, J., Mniszewski, S., and Joslyn, C., Nearest Neighbor Categorization for CASP Function Prediction. Poster presented at Intelligent Systems for Molecular Biology (ISMB 2005), June 2005. (LAUR 05-4782)
Joslyn, CA, SM Mniszewski, KM Verspoor, and JD Cohn. (2005) Improved Order Theoretical Techniques for GO functional annotation. Poster presented at the Intelligent Systems for Molecular Biology (ISMB 2005). (LAUR 05-4781).
Joslyn, CA, JD Cohn, KM Verspoor, SM Mniszewski. (2005) Automating Ontological Function Annotation: Towards a Common Methodological Framework. Poster at the BioOntologies SIG of the Intelligent Systems for Molecular Biology conference, ISMB 2005. (LAUR 05-4779).
KM Verspoor, CA Joslyn, JA Ambrosiano, A Backer, O Bodenreider, L Hirschman, P Karp, H Kelly, S Loranger, M Musen. R Sriram, C Wroe: (2005) Knowledge Integration for Biothreat Response, Los Alamos Unclassified Report (LAUR 05-0907).
Verspoor, Karin, JD Cohn, SM Mniszewski, and CA Joslyn.: (2004) Nearest Neighbor Categorization for Function Prediction. In Proceedings 5th Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction (CASP5) (LAUR 04-7477)
Verspoor, Karin, C. Joslyn and G. Papcun (2004). A Lexical Semantic Network Induced from the Gene Ontology. Los Alamos Unclassified Report LAUR 04-0353.
Verspoor, Karin, Judith Cohn, Cliff Joslyn, Sue Mniszewski, Andreas Rechtsteiner, Luis M. Rocha, Tiago Simas (2004). Protein Annotation as Term Categorization in the Gene Ontology. In the Proceedings of the BioCreative Workshop, March 28-30, 2004. Granada, Spain. (Los Alamos Unclassified Report 04-1460).
Verspoor, C., C. Joslyn and G. Papcun (2003a). "Interactions Between the Gene Ontology and a Domain Corpus for a Biological Natural Language Processing Application". In Proceedings of the Sixth Annual Bio-Ontologies Meeting (Bio-Ontologies 2003), Brisbane, Australia, June 28, 2003. (also Los Alamos Unclassified Report LAUR 03-4481).
Verspoor, C., C. Joslyn and G. Papcun (2003b). "The Gene Ontology as a Source of Lexical Semantic Knowledge for a Biological Natural Language Processing Application". In Proceedings of the SIGIR'03 Workshop on Text Analysis and Search for Bioinformatics, Toronto, CA, August 1, 2003. (also Los Alamos Unclassified Report LAUR 03-4480).
CA Joslyn, KM Verspoor, and G Papcun: (2003) Lexical Management of Domains: Towards Integration of Computational Linguistic and Ontological Resources, Poster at NAS Sackler Workshop on Mapping Knowledge Domains.
Verspoor, C., G. Papcun and K. Sentz (2003). "A Theoretical Motivation for Patterns in Information Extraction". Los Alamos Unclassified Report LAUR 03-1504.
Robert Dale, Stephen J Green, Maria Milosavljevic, Cecile Paris, Cornelia Verspoor and Sandra Williams (1998). Dynamic Document Delivery: Generating Natural Language Texts on Demand. Presented at the 9th International Conference and Workshop on Database and Expert Systems Applications (DEXA'98). August 24 - 28, 1998. University of Vienna, Vienna, Austria.
Wan, Stephen and Verspoor, Cornelia Maria (1998), Automatic English-Chinese name transliteration for development of multilingual resources. In Proceedings of COLING-ACL'98, the joint meeting of 17th International Conference on Computational Linguistics and the 36th Annual Meeting of the Association for Computational Linguistics, Montreal, Canada.
Robert Dale, Stephen J Green, Maria Milosavljevic, Cecile Paris, Cornelia Verspoor and Sandra Williams. Using Natural Language Generation Techniques to Produce Virtual Documents, Proceedings of the Third Australian Document Computing Symposium (ADCS'98). 21st August 1998. Sydney, Australia.
Robert Dale, Stephen J Green, Maria Milosavljevic, Cecile Paris, Cornelia Verspoor and Sandra Williams. The Realities of Generating Natural Language from Databases. In Proceedings of the 11th Australian Joint Conference on Artificial Intelligence. 13-17 July 1998. Brisbane, Australia.
"Phrasal constructs, the lexicon, and multilingual
generation"
Presented at the Hong Kong University of Science and Technology
Computer Science department, 17
February 1998.
Also Presented at Logos
Corp (Mount Arlington, NJ), 10
March 1998 and the Columbia University Computer Science
department, 11 March 1998.
Verspoor, C., Dale, R., Green, S., Milosavljevic, M., Paris, C., and Williams, S. (1998) "Intelligent Agents for Information Presentation: Dynamic Description of Knowledge Base Objects". In the proceedings of the International Workshop on Intelligent Agents on the Internet and Web, Mexico City, Mexico, 16-20 March 1998, pp. 75-86.
"A Lexical Semantic
Account of Prepositional Phrase Modification"
Presented at the 20th annual
meeting of the DGfS
(German Linguistics Society) Halle, Germany, March 4-6 1998;
Workshop on the Syntax of Adverbials: Theoretical and Cross-linguistic
Aspects.
Verspoor, C.M. (1998) "The author explores the issue onto the agenda: Predictivity vs. Stipulativity in the Lexicon" In the proceedings of the Pacific Asia Conference on Language, Information, and Computation, February 18-20, 1998, Singapore, 152-162.
Verspoor, C.M. (1997) "Contextually Dependent Lexical Semantics". PhD thesis, University of Edinburgh
Verspoor, C.M. (1997) "Conventionality-Governed Logical Metonymy" In the proceedings of the 2nd International Workshop on Computational Semantics, H. Bunt, L. Kievit, R. Muskens and M. Verlinden, eds., 300-312, Tilburg, the Netherlands.
Bhuvana Narasimhan, Vittorio Di Tomaso, and Cornelia M. Verspoor (1996) "Unaccusative or Unergative? Verbs of Manner of Motion". Quaderni del laboratorio di linguistica, 10, Scuola Normale Superiore of Pisa
Verspoor, C.M. (1996a) "A Perspective on PPs" Edinburgh Working Papers in Cognitive Science, Vol. 12: Studies in Head-Driven Phrase Structure Grammar, Claire Grover and Enric Vallduvi, eds., pp. 229-271.
Verspoor, C.M. (1996b) "Lexical Limits on the Influence of Context" In Proceedings of the Eighteen Annual Conference of the Cognitive Science Society, Garrison W. Cottrell, ed. Lawrence Erlbaum Associates Publishers, 116-120.
Verspoor, C.M. (1994a) "Reduction of Lexical Redundancy via Semantically-driven Syntactic Generalisations" unpublished ms
Verspoor, C.M. (1994b) "A Cognitively Relevant Lexical Semantics" Centre for Cognitive Science, Master's Thesis, 1994
Verspoor, C.M. (1993) "What are the characteristics of emotional metaphors?" Rice University, undergraduate thesis in Cognitive Science.
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Karin Verspoor verspoor@lanl.gov Last Updated: February 8, 2007 |