SVDMAN

Executables for Linux and DOS are available (see below).

SVDMAN is a program for singular value decomposition analysis of global gene expression data. It is designed to operate both as a stand-alone command line executable and as a component of larger systems for gene expression analysis. It is freely distributed by Los Alamos National Laboratory, please take a copy and use it or build it into your own system for gene expression analysis.

The methods are described in the following paper:

ME Wall, PA Dyck, TS Brettin. SVDMAN -- Singular value decomposition analysis of microarray data. 2001. Bioinformatics 17:566-568.

A preprint is available by clicking here.

and in the following powerpoint presentation (a bit buggy).

P Dyck, M Wall, T Brettin. 2000. J Comp Biol 7:636

Download the latest version (tgz)

DOS executable (exe) in a self-extracting archive. Run the file test.bat to test.

Plain Linux executable (exe). Test files are in the full distribution.